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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015863338.1_cds_XP_016515646.1_27972
CDS Infomation

[gene=LOC107832334] [db_xref=GeneID:107832334] [protein=exosome complex component RRP45A-like] [protein_id=XP_016515646.1] [location=complement(join(93398..93612,95794..95852,96164..96303,96686..96775,97262..97450,97556..97633,97869..97983,98080..98175,98595..98804,99971..100107))] [gbkey=CDS]
Sequence

ATGGAGCAAAGATTAGCAAATACATGGCGAATGACAGTGAATGAGAAAAAGTTCATAGAA
TCTGCATTGGAATCTGAACTGAGAATAGACGGTCGCCGTCCCTTTGATTATCGGAGGCTT
ACAATCAAGTTCGGTAGAGAAGATGGTTCGTCGGAAGTTCAGCTGGGGCAAACTCATGTT
ATGGGCTTTGTTACGTCGCAACTAGTGCAACCTTATCGAGATCGACCAAACGAAGGAACC
CTTTCAGTATTTACTGAATTTTCCCCAATGGCTGATCCTTCATTTGAGGCAGGTCGTCCT
TCAGAGTATGCTGTTGAGCTGGGTCGCATAATTGACAGAGGGTTAAGGGAAAGCAGAGCT
GTGGACACTGAATCACTCTGTGTTGTGGCTGGGAAGTGGGTTTGGTCAATTCGTATTGAT
CTCCATATTTTGGACAATGGAGGTAATCTTGTTGATGCTGCCAATGTTGCTGCTTTAGCT
GCTCTTTTGACATTTCGGAGGCCTGAATGTACACTAGGAGGAGATGACAGGCAGGAAGTG
ATACTGCATCCGCCCGAGGTGAGGGAGCCACTTCCTTTGATTATACACCATTTACCTATA
GCAGTAACTTTTGCATTTATTGGAGACGAGAATTTGGTTATAGATCCAACACATCATGAA
GAAGCTGTTATGGGAGGAAGAATGTCCGTCACCCTGAACACAAATGGCGAAGTCTGTGCA
TTTCAAAAGCCTGGAGGACAGGGTACCATGCAAAGTGTTGTCATGCAGTGTCTACGCATA
GCCTCAGTGAAGGCCGGGGATATAACTAGCAAAATTAAAACCGCTGTTGAATCTTACAAC
ACAGAGAGAGCTCTCAAAATGGTCAAGCGACATGCAAATATTAATGCAGTTGATGTCAAT
GAACCAGGTCAAAAGGCTAAGCAAATCTTGGAGGGGAAAAAAATAAAATCAGAAGAGTGC
AGTGTTAGTCAGAGCGATGACATGGATGTCGAGCAAGGTAGAATCAAGAAGAGGAGTGAT
AAGAACCAGAGTTTCACAGGCGGGCCCTCCAGTTGGGATCCATATTCAGAAGGTGTTAAC
ACAGATGAATTGAAAGCTAATCTTGCTTCTCGTGGTTCAGCAGCAGTACCTATGAAGCTA
GACAATTTAGGTGATGATATTACAGAAGAAAGAAAATCAGATGAACCACTTTCAGATGTT
AGTCCAGTATCATCATTGACTGAGTCGGCTGGAAAAGAAATGGCAACAAGCAGAGAGAAG
ACTTTACAAGATGCTGTTAAGCCTAAAAACAGACGGCGAAAGAAGAAATTGTCTAATTCT
GCAGTTTAG

Peptide Sequence

PEP ID

XP_016515646.1
PEP Infomation

PREDICTED: exosome complex component RRP45A-like [Nicotiana tabacum]
Sequence

MEQRLANTWRMTVNEKKFIESALESELRIDGRRPFDYRRLTIKFGREDGSSEVQLGQTHV
MGFVTSQLVQPYRDRPNEGTLSVFTEFSPMADPSFEAGRPSEYAVELGRIIDRGLRESRA
VDTESLCVVAGKWVWSIRIDLHILDNGGNLVDAANVAALAALLTFRRPECTLGGDDRQEV
ILHPPEVREPLPLIIHHLPIAVTFAFIGDENLVIDPTHHEEAVMGGRMSVTLNTNGEVCA
FQKPGGQGTMQSVVMQCLRIASVKAGDITSKIKTAVESYNTERALKMVKRHANINAVDVN
EPGQKAKQILEGKKIKSEECSVSQSDDMDVEQGRIKKRSDKNQSFTGGPSSWDPYSEGVN
TDELKANLASRGSAAVPMKLDNLGDDITEERKSDEPLSDVSPVSSLTESAGKEMATSREK
TLQDAVKPKNRRRKKKLSNSAV

Transcript Sequence

Gene sequence data has not been registered.